Download Computational Approaches in Chlamydomonas reinhardtii for by Pratyoosh Shukla, M.V.K. Karthik PDF

By Pratyoosh Shukla, M.V.K. Karthik

This booklet describes the feasibility of utilizing molecular dynamics as a screening strategy to establish the soundness of HydA1 and PetF interactions. Structure-based computational methods are essential to realize and represent protein-protein complexes and their capabilities. It introduces the concept that for particular proteins, homology modeling is the best strategy and that docking algorithms are an more and more strong device for offering an in depth rationalization of such interactions. This publication is an invaluable resource of data on biomass-based biofuels for researchers within the box of bio-hydrogen and bioinformatics suggestions. Biofuel and bioenergy made out of unicellular microalgae Chlamydomonas reinhardtii is a fresh strength resource and supplying information regarding sensible optimization in HydA1 and PetF interactions can help researchers to undertake speedy screening tips on how to establish key protein complexes and their capabilities. The e-book additionally presents an creation to hydrogenases and linked Chlamydomonas reinhardtii, that is an invaluable version microorganism for examine on biofuel creation. The e-book makes a speciality of the in silico equipment comparable to phylogenetic stories, homology modeling, molecular docking, electrostatic reviews and conformational research, that have the capability to develop into the main inexpensive equipment for bio-fuel production.

This publication offers a necessary source to senior undergraduate and graduate scholars, researchers, execs and different participants or teams operating within the sector of bioenergy with specific connection with microalgal biofuel.

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Extra resources for Computational Approaches in Chlamydomonas reinhardtii for Effectual Bio-hydrogen Production

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Plant Physiol 50:136–140 Suhre K, Sanejouand Y-H (2004) ElNémo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement. Nucl Acids Res 32:W610–W614 te Beest M, Le Roux JJ, Richardson DM, Brysting AK, Suda J, Kubesova M, Pysek P (2012) The more the better? The role of polyploidy in facilitating plant invasions. Ann Bot 109:19–45 Vignais PM, Colbea A (2004) Molecular biology of microbial hydrogenases. Curr Issues Mol Biol 6(2):159–188 Wang Y, Spalding MH (2006) An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii.

Eur J Biochem 214:475–481 Harris EH (1989) The Chlamydomonas sourcebook: a comprehensive guide to biology and laboratory use. Academic Press, San Diego, 780 pp Heinig M, Frishman D (2004) STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins. Nucl Acids Res 32:W500–W502 Hemschemeier A, Fouchard S, Cournac L et al (2008) Hydrogen production by Chlamydomonas reinhardtii: an elaborate interplay of electron sources and sinks. Planta 227:397–407 Jacobs J, Pudollek S, Hemschemeier A et al (2009) A novel, anaerobically induced ferredoxin in Chlamydomonas reinhardtii.

Nucl Acids Res 32:W500–W502 Hemschemeier A, Fouchard S, Cournac L et al (2008) Hydrogen production by Chlamydomonas reinhardtii: an elaborate interplay of electron sources and sinks. Planta 227:397–407 Jacobs J, Pudollek S, Hemschemeier A et al (2009) A novel, anaerobically induced ferredoxin in Chlamydomonas reinhardtii. FEBS Lett 583:325–329 Jacobson MZ, Colella WG, Golden DM (2005) Cleaning the air and improving health with hydrogen fuel-cell vehicles. Science 308(5730):1901–1905 Jesper Jacobsson T, Fjällström V, Edoff M, Edvinssona T (2014) Sustainable solar hydrogen production: from photoelectrochemical cells to PV-electrolyzers and back again.

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